The Complementarity Plot (CP)

Surface Complementarity	Electrostatic Complementarity
(Sm)	(Em)

A Demonstrative Example of the utility of CP:

The figure shows the distribution of residues in the Complementarity Plot (CP1). For the native polypeptide chain 1PGS (Left) and its corresponding idealized structure (Right) generated utilizing CDL ideal values followed by side-chain optimization by SCWRL4.0. 'Probable', 'less probable and 'improbable' regions of the plot are colored in purple, mauve and sky-blue respectively.

developed at:

Crystallography and Molecular Bilogy Division,
Biophysics Division

Saha Institute of Nuclear Physics

Users reporting results using the Complementarity Plot should cite the following article:

Reference:
Self-Complementarity within Proteins: Bridging the Gap between Binding and Folding
Sankar Basu, Dhananjay Bhattacharyya, and Rahul Banerjee*
Biophysical Journal, Volume 102, Issue 11, June 2012, pp. 2605-2614


Correspondence: rahul.banerjee@saha.ac.in

For queries, suggestions or Bugg-reports regarding the software please contact:
Sankar Basu (sankar.basu@saha.ac.in, nemo8130@gmail.com)

Documentation:

README:

Download:

• SARAMA: The standalone Suite of Programs for the Complementarity Plots (for LINUX Platform)