Distributions of basepair parameters (Mukherjee et. al, 2006) for the A:U w:s T basepairs obtained from non-redundant dataset of RNA crystal structures (Ray et. al, 2012)
Distributions of E-value of the A:U w:s T basepair (Das et. al, 2006) obtained from the crystal database
Ref:
- Das J., Mukherjee S., Mitra A., Bhattacharyya D. (2006) Non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis. J Biomol Struct Dynam 24(2), 149-161.
- Mukherjee S., Bansal M., Bhattacharyya D. (2006) Conformational specificity of non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis. J. Comp. Aided Mol. Des. 20(10-11), 629-45.
- Ray S. S., Halder S., Kaypee S., Bhattacharyya D. (2012) HD-RNAS: an automated hierarchical database of RNA structures. Front. Genet. 3, 59.