Basepairs involving Sugar(S) edge of Adenine and WatsonCrick(W) edge of Adenine is shown. Highlighted examples are found from RNA crystal structures obtained from PDB.
Base pairs stabilized by C-H...N/O interactions along with C-H...N/O interactions
|
Basepair (type & Orientation) |
*Frequency |
Example |
Hydrogen bonding atoms with their
precursors |
|
1 | Optimized Model Structure |
C5-N1...C2-C6 C4-C2...N3-C5 |
|
|
7 | Optimized Model Structure |
N7-N6...N3-C5 C4-N1...C2-C6 |
Base pairs stabilized by N-H...N/O type hydrogen bonds only
|
Basepair (type & Orientation) |
*Frequency |
Example |
Hydrogen bonding atoms with their
precursors |
| Residue Nos.89(D)-96(D) PDB ID 1N78 |
N7-N6 ... N3-C5 C4-N1 ... O2'-C8 |